紫色土丘陵坡地土壤微生物群落的季节变化

采用稀释平板法和Biolog-ECO微平板技术,以剌槐（Robinia pseudoacacia）天然次生林为研究对象,研究湖南省衡阳市紫色土丘陵坡地表层（0~10 cm）土壤微生物群落的季节变化特征。结果表明：1）夏季,土壤微生物总数,细菌数量、真菌数量和放线菌数量最高,分别为16.34×106、16.09×106、10.43×104和14.64×104 cfu·g-1干土,春季次之：11.61×106、11.45×106、5.00×104和10.65×104 cfu·g-1干土,秋季最低：5.87×106、5.78×106、4.67×104和4.08×104 cfu·g-1干土,春、夏和秋3季的差异达显著水平（P<0.05）;2）在培养168 h时,土壤微生物C源平均颜色变化率（Average well color development, AWCD）以夏季最高（1.20）,春季次之（0.88）,秋季最低（0.83）;3）土壤微生物功能多样性表现为夏季明显高于春、秋2季（P<0.05）,夏季的Patrick丰富度指数（R）（28）、Shannon-Wiener指数（H）（3.22）、Simpson指数（D）（0.96）和McIntosh指数（U）（8.20）显著高于春、秋2季（P<0.05）,而春、秋2季的R（23,24）、H（3.06,3.08）、D（0.95,0.95）和U（5.90,5.91）无显著差异（P>0.05）;4）氨基酸类、聚合物类和羧酸C源类是衡阳紫色土丘陵坡地土壤微生物偏好且利用率较高的C源类型;5）主成分分析表明,土壤微生物群落的C源利用可分为2类,一类在夏季,另一类在春、秋2季,其得分系数的分布范围分别为（2.59~6.00,2.43~5.09）和（-7.65~-1.90,-6.38~-3.43）。研究结果为科学评价湖南省衡阳市紫色土丘陵坡地土壤生境质量退化和恢复过程中微生物特征的变化提供了本底值参考。     

黄河三角洲自然保护区秋冬季水鸟群落组成与生境关系分析

于2014年10月至2015年1月采用样线调查法对黄河三角洲自然保护区秋季迁徙期和越冬期水鸟群落结构进行调查研究,调查共包括8条样线40个观测点.结果表明:(1)秋季迁徙期共记录水鸟6目14科54种,国家Ⅰ级保护鸟类5种,国家Ⅱ级保护鸟类8种;越冬期共记录水鸟5目7科31种,国家Ⅰ级保护鸟类1种,国家Ⅱ级保护鸟类4种.(2)2个时期雁形目水鸟种类和数量均占优势,豆雁(Anser fabalis)、斑嘴鸭(Anas poecilorhycha)、赤膀鸭(Anas strepera)和绿头鸭(Anas platyrhynchos)为优势物种,丹顶鹤(Grus japonensis)、东方白鹳(Ciconia boyciana)和大大鹅(Cygnus cygnus)等珍稀水鸟也有一定的种群数量.(3)秋季迁徙期水鸟种数、数量和ShannonWiener多样性指数多于或高于越冬期.(4)5种典型生境之间水鸟种类和数量存在差异,天然水域是水鸟群落的主要分布区.(5)自然生境内的水鸟种数、数量和Shannon-Wiener多样性指数一般多于或高于人工生境.相似性分析结果表明,自然生境之间水鸟群落结构相似程度高于人工生境.     

青岛近海生物气溶胶中可培养微生物浓度及群落多样性的季节变化

为了研究近海生物气溶胶中可培养微生物浓度和群落多样性,于2009年7月~2010年6月在青岛两个采样点连续采集生物气溶胶样品,分析了其中陆源细菌、海源细菌、陆源真菌和海源真菌的浓度,并计算了Shannon-Weiner指数、Simpson’s指数和Pielou指数.结果表明,陆源细菌和海源细菌月均浓度分别为12~436 CFU·m-3和25~561 CFU·m-3,陆源真菌和海源真菌月均浓度分别为0~817 CFU·m-3和11~1 346 CFU·m-3之间.陆源细菌、海源细菌、陆源真菌和海源真菌浓度在冬季月份较低,2月达到最低值,在春夏月份较高.海源微生物对总可培养类微生物的贡献高于陆源,平均占63%.可培养微生物物种数在17~102之间,与微生物浓度具有一定的相关性,但并未呈现出明显的季节变化.3种指数表明,生物气溶胶中陆源细菌、海源细菌、陆源真菌和海源真菌的群落结构在2月最简单,1月、11月和5月群落多样性较高,群落多样性与浓度的季节变化特征并不一致,而且不同类别的微生物群落存在季节和空间差异.     

上海大气降水中细菌气溶胶的多样性研究

采用分子生物学技术16S rRNA克隆文库方法,以上海市2012年不同月份的大气降水样品为模板构建细菌16S rRNA克隆文库,对连续5个月的大气降水样品中细菌群落结构组成及多样性进行了研究,并对其群落结构的生物多样性、物种丰度及覆盖率等进行了分析比较.结果表明,变形菌门(Proteobacteria)(α-,β-,γ-)是上海市降水样品中细菌的优势菌群(32.5%~94.1%),另外还包括拟杆菌门(Bacteroidetes)、放线菌门(Actinobacteria)、异常球菌-栖热菌门(Deinococcus-Thermus)、蓝藻门(Cyanobacteria)、酸杆菌门(Acidobacteria)、厚壁菌门(Firmicutes)共7个主要门类的细菌,以及未定菌(TM7).多样性指数分析结果显示,不同月份降水样品的细菌群落结构组成与多样性均存在着差异性,夏季6月样品的细菌群落生物多样性及物种丰度明显高于其它样品,其次是秋季8月的样品.     

Genetic Bottlenecks Driven by Population Disconnection

Abstract: Connectivity among populations plays a crucial role in maintaining genetic variation at a local scale, especially in small populations affected strongly by genetic drift. The negative consequences of population disconnection on allelic richness and gene diversity (heterozygosity) are well recognized and empirically established. It is not well recognized, however, that a sudden drop in local effective population size induced by such disconnection produces a temporary disequilibrium in allelic frequency distributions that is akin to the genetic signature of a demographic bottleneck. To document this effect, we used individual‐based simulations and empirical data on allelic richness and gene diversity in six pairs of isolated versus well‐connected (core) populations of European tree frogs. In our simulations, population disconnection depressed allelic richness more than heterozygosity and thus resulted in a temporary excess in gene diversity relative to mutation drift equilibrium (i.e., signature of a genetic bottleneck). We observed a similar excess in gene diversity in isolated populations of tree frogs. Our results show that population disconnection can create a genetic bottleneck in the absence of demographic collapse.     

Bacterial diversity in paclobutrazol applied agricultural soils

The aim of this study was to investigate the bacterial communities on paclobutrazol [(2RS, 3RS)-1-(4-Chlorophenyl)-4, 4-dimethyl-2-(1H-1,2,4-triazol-1-yl) pentan-3-ol]–applied agricultural soils by denaturing gradient gel electrophoresis (DGGE) of polymerase chain reaction (PCR) amplified 16S rDNA gene fragments. Three different agricultural soil samples were collected from paclobutrazol applied mango and waxapple orchards, peanut fields and untreated rice fields as a control for DGGE analysis. The DGGE pattern of PCR- generated 16S rDNA gene fragments indicated that the bacterial populations from four paclobutrazol–applied soils of peanut fields were closely related to each other and two paclobutrazol–applied soils of mango and waxapple orchards harbored closely related bacterial communities. But, paclobutrazol–free agricultural soils comprised relatively a different bacterial group. However, the bacterial populations of mango and waxapple orchard are completely different from the bacterial communities of peanut field. Further purification and sequence analysis of 40 DGGE bands followed by phylogenetic tree assay showed similar results that soil bacteria from paclobutrazol applied mango and waxapple orchard are phylogenetically related. Based on the phylogenetic analysis, the clone M-4 was clad 100 % (bootstrap value) with Mycobacterium sp. The Mycobacterium sp. has been proved to degrade the phenolic compounds such as phenol, 4-chlorphenol, 2,4-dichlorophenol and paclobutrazol molecule containing chlorobenzene ring.     

滇西北高原生态恢复过程中土壤侵蚀特征及其影响因子

滇西北高原由于地处生态脆弱的石灰岩区,水土流失严重,探讨该区生态恢复过程中土壤侵蚀的变化规律,为开展人工植被建设提供依据。以时空互代的方法,通过径流小区,对坡面的产沙产流特性及其影响因素进行研究。结果表明:天然次生林和人工混交林均有较好的调节径流和减少泥沙的作用,产沙量分别比坡耕地减少了51.46%、43.18%,产流量也相应降低了39.39%、24.24%。在最大次降雨条件下,荒草丛、坡耕地、次生林和混交林单次降雨的产沙量分别占试验期产沙总量的55.38%、55.58%、58.35%和58.05%,产流量相应占产流总量的64.72%、64.63%、73.85%和55.39%。而且,产流产沙量与土壤有机质质量分数均存在明显正相关,与乔、灌层植物多样性及均匀度指数等呈显著负相关性(P<0.05)。因此,乔灌草结合的群落结构配置模式是滇西北地区水土保持林营造的目标和方向。     

缙云山银木荷(Schima argentea Pritz.ex Diels)林物种组成与多样性变化

定位研究了25a来缙云山银木荷林物种组成及多样性在自然演替过程中的动态变化。结果表明,银木荷林维管植物物种由57种(隶属于24科,46属)减少到38种(隶属于19科,26属)。林下草本和层间植物逐渐消失,胸径大于7.5cm的乔木层树总胸断面积有所减少。尽管群落物种组成以及多样性发生改变,但是银木荷依然是优势树种,处于林冠层,而林冠亚层的白毛新木姜子、四川山矾、长蕊杜鹃逐渐增多,短刺米槠逐渐减少。群落乔木层4个α多样性指数都呈下降趋势,丰富度指数由2.98下降为1.99,Shannon-Wiener指数25a间减小了0.34,Simpson指数和Pielou指数变化都很小;β多样性分析结果显示,银木荷群落的物种差异很大。研究表明,25a间群落物种差异显著。揭示缙云山银木荷林自然演替过程中的物种组成和多样性变化规律,可为缙云山保护区及长江流域中上游亚热带常绿阔叶林的银木荷群落的管理提供一定的参考价值。     

Metabolic diversity of the heterotrophic microorganisms and potential link to pollution of the Rouge River

The heterotrophic microbial communities of the Rouge River were tracked using Biolog Ecoplates to understand the metabolic diversity at different temporal and spatial scales, and potential link to river pollution. Site less impacted by anthrophogenic sources (site 1), showed markedly lower metabolic diversity. The only substrates that were utilized in the water samples were carbohydrates. Sites more impacted by anthrophogenic sources (sites 8 and 9) showed higher metabolic diversity. Higher functional diversity was linked to the physico-chemical and biological properties of the water samples (i.e. higher concentrations of DO, DOC, chlorophyll, and bacterial density). Biolog analysis was found to be useful in differentiating metabolic diversity between microbial communities; in determining factors that most influence the separation of communities; and in identifying which substrates were most utilized by the communities. It can also be used as an effective ecological indicator of changes in river function attributable to urbanization and pollution.     

Pseudoreplication in Tropical Forests and the Resulting Effects on Biodiversity Conservation

Tropical forest ecosystems are threatened by habitat conversion and other anthropogenic actions. Timber production forests can augment the conservation value of primary forest reserves, but studies of logging effects often yield contradictory findings and thus inhibit efforts to develop clear conservation strategies. We hypothesized that much of this variability reflects a common methodological flaw, simple pseudoreplication, that confounds logging effects with preexisting spatial variation. We reviewed recent studies of the effects of logging on biodiversity in tropical forests (n = 77) and found that 68% were definitively pseudoreplicated while only 7% were definitively free of pseudoreplication. The remaining proportion could not be clearly categorized. In addition, we collected compositional data on 7 taxa in 24 primary forest research plots and systematically analyzed subsets of these plots to calculate the probability that a pseudoreplicated comparison would incorrectly identify a treatment effect. Rates of false inference (i.e., the spurious detection of a treatment effect) were >0.5 for 2 taxa, 0.3–0.5 for 2 taxa, and <0.3 for 3 taxa. Our findings demonstrate that tropical conservation strategies are being informed by a body of literature that is rife with unwarranted inferences. Addressing pseudoreplication is essential for accurately assessing biodiversity in logged forests, identifying the relative merits of specific management practices and landscape configurations, and effectively balancing conservation with timber production in tropical forests. Pseudoreplicación en Bosques Tropicales y Efectos Resultantes Sobre la Conservación de Biodiversidad